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Getting concepts into data frames
The basic process is: To bring content into R, first search the concept library for the concept you want and note its ID number. If you want to get a specific version of a concept, also note its version ID (if not specified, you will always get the latest version). Then use the commands below to retrieve concepts.
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library(ConceptLibraryClient); #Retrieve the latest version of a concept. You will be prompted for a username and password copd_icd10 = ConceptLibraryClient::get_concept_codes( url='https://conceptlibrary.saildatabank.com', id=141 ); #View the retrieved data frame copd_icd10; #Set your credentials so you don't have to log in for each command. credentials = create_auth(); #Get a concept, explicitly specifying a particular version. copd_icd10_20200602 = get_concept_codes( url='https://conceptlibrary.saildatabank.com', id=141, version=392, auth=credentials #Supply username and password ); #Retrieve multiple concepts into a single data frame comorbidities_primary_care = get_concept_codes( url='https://conceptlibrary.saildatabank.com', id=c(140,142,144), auth=credentials ); |
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