library(ConceptLibraryClient);
library(SAILDBUtils);
# Create a connection to the SAIL Database. You will be prompted for username/password
db <- SAILDBUtils::SAILConnect();
# Retrieve the latest version of a concept. You will be prompted for a username and password
copd_icd10 = ConceptLibraryClient::get_concept_codes(
url='https://conceptlibrary.saildatabank.com',
id=141
);
# View the retrieved data frame
copd_icd10;
# Set your credentials so you don't have to log in for each command.
credentials = create_auth();
# Get a concept, explicitly specifying a particular version.
copd_icd10_20200602 = get_concept_codes(
url='https://conceptlibrary.saildatabank.com',
id=141,
version=392,
auth=credentials #Supply username and password
);
# Retrieve multiple concepts into a single data frame
comorbidities_primary_care = get_concept_codes(
url='https://conceptlibrary.saildatabank.com',
id=c(140,142,144),
auth=credentials
);
# Save a dataframe to the database:
SAILDBUtils::create_table_from_df(
db_conn=db,
output_table='sailw1234v.code_table', # the name of the table you want to create should go here
df = copd_icd10_20200602 # the concept you wish to save to the database
) |